| pacakge_name | function_name | parameter | time |
|---|---|---|---|
| massprocesser | process_data | path:/home/data/shawn/02.project/33.cyk/seedling/working_dir/02.progress/transform/MS1/POS/ | 2024-12-31 10:51:32 |
| massprocesser | process_data | polarity:positive | 2024-12-31 10:51:32 |
| massprocesser | process_data | ppm:8 | 2024-12-31 10:51:32 |
| massprocesser | process_data | peakwidth:5,25 | 2024-12-31 10:51:32 |
| massprocesser | process_data | snthresh:3 | 2024-12-31 10:51:32 |
| massprocesser | process_data | prefilter:3,11460 | 2024-12-31 10:51:32 |
| massprocesser | process_data | fitgauss:FALSE | 2024-12-31 10:51:32 |
| massprocesser | process_data | integrate:1 | 2024-12-31 10:51:32 |
| massprocesser | process_data | mzdiff:-0.01 | 2024-12-31 10:51:32 |
| massprocesser | process_data | noise:11460 | 2024-12-31 10:51:32 |
| massprocesser | process_data | threads:40 | 2024-12-31 10:51:32 |
| massprocesser | process_data | binSize:0.025 | 2024-12-31 10:51:32 |
| massprocesser | process_data | bw:5 | 2024-12-31 10:51:32 |
| massprocesser | process_data | output_tic:TRUE | 2024-12-31 10:51:32 |
| massprocesser | process_data | output_bpc:TRUE | 2024-12-31 10:51:32 |
| massprocesser | process_data | output_rt_correction_plot:TRUE | 2024-12-31 10:51:32 |
| massprocesser | process_data | min_fraction:0.5 | 2024-12-31 10:51:32 |
| massprocesser | process_data | fill_peaks:FALSE | 2024-12-31 10:51:32 |
| massdataset | create_mass_dataset() | no:no | 2024-12-31 10:53:20 |
#> --------------------
#> massdataset version: 1.0.5
#> --------------------
#> 1.expression_data:[ 6314 x 22 data.frame]
#> 2.sample_info:[ 22 x 5 data.frame]
#> 3.variable_info:[ 6314 x 3 data.frame]
#> 4.sample_info_note:[ 5 x 2 data.frame]
#> 5.variable_info_note:[ 3 x 2 data.frame]
#> 6.ms2_data:[ 0 variables x 0 MS2 spectra]
#> --------------------
#> Processing information (extract_process_info())
#> create_mass_dataset ----------
#> Package Function.used Time
#> 1 massdataset create_mass_dataset() 2024-12-31 10:53:20
#> process_data ----------
#> Package Function.used Time
#> 1 massprocesser process_data 2024-12-31 10:51:32
Black is MV.